Genomics|Update|Infectious Diseases ► Detection and Diagnosis [2]

Genomics|Update|Infectious Diseases

Volume 34  Number 4  January 29 - February 5, 2015

Detection and Diagnosis

Isolation and development of bioluminescent reporter phages for bacterial dysentery
Schofield DA, et al. J Clin Microbiol Infect Dis 2015 Feb;34(2):395-403.

Novel multiplex format of an extended multilocus variable-number-tandem-repeat analysis of Clostridium difficile correlates with tandem repeat sequence typing 
Jensen MB, et al. J Microbiol Methods. 2015 Jan 22.

DNA microarray-based PCR ribotyping of Clostridium difficile
Schneeberg A, et al. J Clin Microbiol 2015; 53(2):433-442.

Development of a rapid multiplex PCR assay to genotype Pasteurella multocida strains by use of the lipopolysaccharide outer core biosynthesis locus
Harper M, et al. J Clin Microbiol 2015; 53(2):477-485.

Development of a multiple-locus variable-number tandem-repeat typing scheme for genetic fingerprinting of Burkholderia cenocepacia and application to nationwide epidemiological analysis
Segonds C, et al. J Clin Microbiol 2015; 53(2):398-409.

Gordonia species as emerging causes of continuous-ambulatory-peritoneal-dialysis-related peritonitis identified by 16S rRNA and secA1 gene sequencing and matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF MS)
Lam JY, et al. J Clin Microbiol 2015; 53(2):671-676.

High-throughput mycobacterial interspersed repetitive-unit–variable-number tandem-repeat genotyping for Mycobacterium tuberculosis epidemiological studies
Gauthier M, et al. J Clin Microbiol 2015; 53(2):498-503.

A diagnostic HIV-1 tropism system based on sequence relatedness
Edwards S, et al. J Clin Microbiol 2015; 53(2):597-610.

Accurate quantification of episomal HIV-1 two-long terminal repeat circles by use of optimized DNA isolation and droplet digital PCR
Malatnikova E, et al. J Clin Microbiol 2015; 53(2):699-701.

Use of matrix-assisted laser desorption ionization–time of flight mass spectrometry for identification of molds of the Fusarium genus
Triest D, et al. J Clin Microbiol 2015; 53(2):465-476.

Design and evaluation of peptide nucleic acid probes for specific identification of Candida albicans
Kim HJ, Brehm-Stecher BF. J Clin Microbiol 2015; 53(2): 511-521.

Microsatellite (STRAf) genotyping cannot differentiate between invasive and colonizing Aspergillus fumigatus isolates
Escribano P, et al. J Clin Microbiol 2015; 53(2):667-670.

Isolation and enrichment of Cryptosporidium DNA and verification of DNA purity for whole-genome sequencing
Guo Y, et al. J Clin Microbiol 2015; 53(2):641-647.

Comparison of matrix-assisted laser desorption ionization–time of flight mass spectrometry and molecular biology techniques for identification of Culicoides (Diptera: Ceratopogonidae) biting midges in Senegal
Sambou M, et al. J Clin Microbiol 2015; 53(2):410-418.

Diagnosis of community-acquired acute respiratory illness: From conventional microbiological methods to molecular detection (multiplex)
Bouvet D, et al. Pathol Biol (Paris). 2015 Jan 13.

Reducing time to identification of positive blood cultures with MALDI-TOF MS analysis after a 5-h subculture
Verroken A, et al. Eur J Clin Microbiol Infect Dis. 2015 Feb;34(2):405-13.

A systematic review of matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry compared to routine microbiological methods for the time taken to identify microbial organisms from positive blood cultures
Dixon P, et al. Eur J Clin Microbiol Infect Dis. 2015 Jan 27.

First experience of a multicenter external quality assessment of molecular 16S rRNA gene detection in bone and joint infections
Plouzeau C, et al. J Clin Microbiol 2015; 53(2):419-424.